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STUDENT GUIDE: Bacterial Transformation with Mystery DNA


Some questions to get you thinking about today’s lab:
What can we use DNA for?

 
 
How can DNA be put into bacteria?

 
 
Why would we want to put DNA into bacteria?

 
 
How can we tell DNA is in the bacteria once we put it there?

 
 
What is a plasmid? What is ampicillin?

 
 
Materials for each group (students should work in groups of 4):

Tube of mystery plasmid DNA (tubes numbered 1 or 2)
1 tube of LB broth
One tube of E. coli bacteria (on ice)
micropipette
1 LB agar plate
micropipette tips
1 LB agar plate with ampicillin for DNA (2 black stripes)
small transfer pipet
Q-tips or innoculation loops
large transfer pipet

Materials to share:
Water bath at 42°C
ice
trash containers/biohazard waste bag
UV lights
 
Protocol:
1. Pipette the DNA solution from your numbered DNA tube into your E. coli bacteria tube and label the tube 1 or 2

2. Put tubes on ice for 5 minutes. Why do you think we put the tubes on ice?
 
3. In the meantime, each group should get one LB agar plate and one LB agar + ampicillin plate. Write your initials and your section number on your plates. You will be plating bacteria with DNA on an LB agar plate and on an LB agar +ampicillin plate. Mark these two plates with the DNA number on your tube. Where is the best place to label your plates? What is the control you are conducting?

 
4. Put tubes directly from ice into 42°C water bath for 50 seconds. What do you think heating the tubes does?

 
5. Put DNA tubes directly from water bath onto ice for 2 minutes.

 
6. With a large transfer pipet, add 0.25 ml LB broth into your DNA tube ( bring solution to the first mark on the pipet.) Incubate at room temperature for 10 minutes. What is the LB broth for?

 
7. With the small transfer pipet, pipet 0.15 ml (about half) from your DNA tube onto your LB agar plate and 0.15 ml onto your LB agar + ampicillin plate.

 
8. Spread the solutions on the plates using a sterile Q-tip. Be careful not to stab the agar.

 
9. Put your plates in a 37°C incubator for 24 hours. Why 37°C?


 
Challenge for Day 2: What is ampicillin and why do you think we used it in some of the plates?


 
What do you expect to grow on each of the plates?
 
 
LB agar

LB agar + ampicillin
(2 black stripes)

Do you expect to see any difference in bacterial growth on the two plates?

bacteria + DNA
     

 


What do you think would have grown on these plates if no DNA had been added to these bacteria?
 
 
LB agar

LB agar + ampicillin
(2 black stripes)

Do you expect to see any difference in bacterial growth on the two plates?

bacteria
(without DNA)
     


 
 
       
 
Day 2:

What do you see on your plates?


 
 
Now look at your plates with UV light. What do you see?



 
 
Fill in the table with your data and the class data-
what does each group (#1 and 2) see on each type of plate?


Mystery DNA
(number)
 
LB agar

LB agar + ampicillin
(2 black stripes)

Based on the phenotype,
what is the DNA?
#1
     
#2
     


 
 
What does each DNA type (1 and 2) allow the bacteria to do?
 
 

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BIOTECH Project
Department of Molecular and Cellular Biology
The University of Arizona

Last Modified March 8, 2002

Nadja Anderson, Ph.D.
nadjal@email.arizona.edu
http://biotech.biology.arizona.edu